docs: reorganise -- current reference gathered, finished work archived, superseded and dead ideas marked as such
docs/CLAUDE.md Phase 2, 2026-10-14. All moves by git mv; every archived file carries a header saying what it is, why, and where to look instead. - docs/reference/ (new): roadmap and versioning policy, M7.1, word-ACL design, kernel args, hosted acceptance test, dictionary, primitives, ontology, L8 table -- previously spread over docs/, docs/lithosananke/ and docs/03-architecture/. - docs/working/archive/historical/: finished work (session plan, test-gap audit, birthing plan, fix write-ups, the January architecture draft). - docs/working/archive/superseded/: the Hermes-VM Tripod docs and July Hermes designs (-> FABRIC-3.5/3.6), the StarForth roadmap, every working doc already flagged superseded or obsolete. - docs/working/archive/dead/: the hal_* target contract (never adopted), L4Re, metrics-and-knobs. - Papers and proposals into docs/working/papers/. - References rewritten across the repo (not logs/, not docs/patent/); CLAUDE.md's documentation section rewritten. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
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@@ -48,7 +48,7 @@
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\part{$2^7$ Factorial Campaign}
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\chapter{Campaign Design}
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%% SOURCE: docs/working/experiments/02-experiments/factorial-doe/guide.md
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%% SOURCE: docs/working/archive/superseded/factorial-doe/guide.md
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%% docs/working/experiments/campaigns/doe_2x7/README.md
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\input{../scraps/experiments/02-experiments/factorial-doe/guide}
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\input{../scraps/experiments/02-experiments/factorial-doe/workflow}
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@@ -57,7 +57,7 @@
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\input{../scraps/experiments/campaigns/shape_validation/README}
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\chapter{Incompatible Configurations}
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%% SOURCE: docs/working/experiments/02-experiments/factorial-doe/incompatible-configs.md
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%% SOURCE: docs/working/archive/superseded/factorial-doe/incompatible-configs.md
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\input{../scraps/experiments/02-experiments/factorial-doe/incompatible-configs}
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\chapter{Campaign Results — 90 Runs}
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@@ -146,8 +146,8 @@
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\part{Supplementary Campaigns}
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\chapter{Heartbeat DoE}
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%% SOURCE: docs/working/experiments/02-experiments/heartbeat-doe/design.md
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%% docs/working/experiments/02-experiments/heartbeat-doe/corrected-design.md
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%% SOURCE: docs/working/archive/superseded/heartbeat-doe-design.md
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%% docs/working/archive/superseded/heartbeat-doe-corrected-design.md
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\input{../scraps/experiments/02-experiments/heartbeat-doe/design}
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\input{../scraps/experiments/02-experiments/heartbeat-doe/corrected-design}
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\input{../scraps/experiments/02-experiments/heartbeat-doe/implementation-summary}
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